Lists of publications are available for the following topics. Some publications are available for download in PDF format by clicking on the linked publication title.

Fish Ecology and Management
Stream Ecology and Management
Riparian Ecology and Management
Wetlands Ecology and Management
Ecotoxicology
Miscellaneous

1. Burrell, K. H., D. H. Van Lear, D. B. Bunnell, J. J., and C. A. Dolloff. 2000. Seasonal movement of brown trout in a southern Appalachian river. Transactions of the American Fisheries Society 129:1373-1379. (51k)
2. Flebbe, P. A., and J. A. Herrig. 2000. Patterns of aquatic species imperilment in the Southern Appalachians: an evaluation of regional databases. Environmental Management. 25(6): 681-694. (197k)
3. Dolloff, C. A., and M. K. Underwood. 1997. Habitat, water chemistry, and fish populations in five Shenandoah National Park watersheds. Pages 143-147 In R. E. Gresswell, P. Dwyer, and R. H. Hamre, eds. Proceedings of Wild Trout VI - Putting the Native Back in Wild Trout.
4. Flebbe, P. A. 1997. Global climate change and fragmentation of native brook trout distribution in the southern Appalachian Mountains. Pages 117-121 In R. E. Gresswell, P. Dwyer, and R. H. Hamre, eds. Proceedings of Wild Trout VI - Putting the Native Back in Wild Trout.
5. Leftwich, K. N., P. L. Angermeier, and C. A. Dolloff. 1997. Factors influencing behavior and transferability of habitat models for benthic stream fish. Transactions of the American Fisheries Society 126: 725-734. (876k)
6. Ensign, W. E., K. N. Leftwich, P. L. Angermeier, and C. A. Dolloff. 1997. Factors influencing stream fish recovery following a large-scale disturbance. Transactions of the American Fisheries Society 126: 895-907. (1277k)
7. Dolloff, C. A., J. Kershner, and R. Thurow. 1996. Underwater methods. chapter 18 in B. Murphy and D. Willis, editors. Fisheries Techniques, 2nd edition. American Fisheries Society, Bethesda, MD.
8. Newman. K. R., and C. A. Dolloff. 1995. Responses of blacknose dace (Rhinichthys atratulus) and brook charr (Salvelinus fontinalis) to acidified water in a laboratory stream. Journal of Water, Air, and Soil Pollution 85: 371-376. (311k)
9. Bulger, A. J., C. A. Dolloff, B. J. Cosby, K. N. Eshelman, J. N. Galloway, and J. R. Webb. 1995. The Shenandoah National Park: Fish In Sensitive Habitats (SNP: FISH) project: an integrated assessment of fish community response to stream acidification. Journal of Water, Air, and Soil Pollution 85: 309-314. (384k)
10. Ensign, W. E., P. L. Angermeier, and C. A. Dolloff. 1995. Use of underwater observation to estimate density of benthic stream fishes. Canadian Journal of Fisheries and Aquatic Sciences 52: 213-222.
11. Dolloff, C. A., P. A. Flebbe, and M. D. Owen. 1994. Fish habitat and fish populations in a southern Appalachian watershed before and after Hurricane Hugo. Transactions of the American Fisheries Society 123: 668-678. (910k)
12. Flebbe, P. A. 1994. A regional view of the margin: salmonid abundance and distribution in the southern Appalachian Mountains of North Carolina and Virginia. Transactions of the American Fisheries Society 123: 657-667.
13. Flebbe, P. A. 1993. Comment on Meisner (1990) Effect of climatic warming on the southern margins of the native range of brook trout, Salvelinus fontinalis. Canadian Journal of Fisheries and Aquatic Sciences 50: 883-884.
14. Schmitt, C. J., A. D. Lemly, and P. V. Winger. 1993. Habitat Suitability Index (HSI) Model for Brook Trout (Salvelinus fontinalis) in Streams of the Southern Blue Ridge Province: Surrogate Variables, Model Evaluation, and Suggested Improvements. Biological Report 18. U.S. Fish and Wildlife Service, Washington, DC. 43 pages.

1. Bulger, A. J., B. J. Cosby, C. A. Dolloff, K. N. Eshelman, J. R. Webb, and J. N. Galloway. 2000. The Shenandoah National Park: Fish In Sensitive Habitats (SNP: FISH) project: an integrated assessment of fish community responses to stream acidification. Final Report, Volumes 1-4.
2. Lemly, A. D. 2000. Techniques of fisheries management: water quality assessment with stream insects. Workshop Notes: Silviculture in the Southern Appalachian Mountains Program of Advanced Studies in Silviculture. 30-31. (18k)
3. Lemly, A. D., and R. H. Hilderbrand. 2000. Influence of large woody debris on stream insect communities and benthic detritus. Hydrobiologia. 421: 179-185. (109k)
4. Hilderbrand, R. H., A. D. Lemly, and C. A. Dolloff. 1999. Habitat sequencing and the importance of discharge in inferences. North American Journal of Fisheries Management. 19: 198-202. (36k)
5. Hilderbrand, R. H., A. D. Lemly, C. A. Dolloff, and K. L. Harpster. 1998. Design Considerations for Large Woody Debris Placement in Stream Enhancement Projects. North American Journal of Fisheries Management. 18: 161-167. (163k)
6. Flebbe, P. A. In press. Trout use of woody debris and habitat in Wine Spring Creek, North Carolina. Forest Ecology and Management.
7. Lemly, A. D. In Press. Bacterial growth on stream insects: potential for use in bioassessment. Journal of the North American Benthological Society.
8. Moore, M.V., M.L. Pace, J.R. Mather, P.S. Murdoch, R.W. Howarth, C.L. Folt, C.Y. Chen, H.F. Hemond, P. A. Flebbe, and C.T. Driscoll. 1997. Potential effects of climate change on freshwater ecosystems of the New England/Midatlantic region. Hydrologic Processes 11:925-947.
9. Dolloff, C. A., H. E. Jennings, and M.D. Owen. 1997. A comparison of basinwide and representative reach habitat survey techniques in three southern Appalachian watersheds. North American Journal of Fisheries Management 17: 339-347. (912k)
10. Hilderbrand, R. H., A. D. Lemly, C. A. Dolloff, and K. L. Harpster. 1997. Effects of large woody debris placement on stream channels and benthic invertebrates. Canadian Journal of Fisheries and Aquatic Sciences 54: 931-939. (181k)
11. Holcomb, J., P. A. Flebbe, and R. Burns. 1996. Chapter 1: Introduction to the aquatic technical report. Pages 9-13 in The Southern Appalachian Assessment aquatic technical report, report 2 of 5. U.S. Forest Service, Southern Region, Atlanta. (310k)
12. Flebbe, P. A., J. Harrison, G. Kappesser, D. Melgaard, J. Riley, and L. W. Swift [Jr.]. 1996. Chapter 2: Status of aquatic resources. Pages 15-63 in The Southern Appalachian Assessment aquatic technical report, report 2 of 5. U.S. Forest Service, Southern Region, Atlanta. (870k)
13. Flebbe, P. A., J. Holcomb, J. Harrison, and L. W. Swift [Jr.]. 1996. Chapter 7: Evaluation of the assessment, integration of findings, data gaps, and future work. Pages 133-140 in The Southern Appalachian Assessment aquatic technical report, report 2 of 5. U.S. Forest Service, Southern Region, Atlanta. (35k)
14. Dolloff, C. A. 1996. Large woody debris, fish habitat and historical land use. Pages 130-139 In McMinn, J. W., and D. A. Crossley, Jr., eds. Biodiversity and and coarse woody debris in southern forests, proceedings of the workshop on coarse woody debris in southern forests: effects on biodiversity; 1993 October 18-20; Athens, GA. Gen. Tech. Rep. SE-94, Asheville, NC: U.S. Department of Agriculture, Forest Service, Southern Research Station. 146 p.
15. Dolloff, C. A. 1996. Ecological role of large woody debris in forest streams. Pages 54-58 In Neary, D., K. C. Ross, and S.S. Coleman, eds. National Hydrology Workshop Proceedings; 1992 April 27-May 1; Phoenix, AZ. General Technical Report RM-GTR-279. Fort Collins, CO: U.S. Department of Agriculture, Rocky Mountain Forest and Range Experiment Station. 210 p.
16. Dolloff, C. A. 1996. "Ecological role of large woody debris in forest streams." Pages 54-57 In Neary, D., K. M. Ross, and S. S. Coleman, eds. National Hydrology Workshop Proceedings; 1992 April 27-May 1; Phoenix, AZ. Gen. Tech. Rep. RM-GTR-279. Fort Collins, CO. U.S. Department of Agriculture, Forest Service, Rocky Mountain Forest and Range Experiment Station. 210 p.
17. Dolloff, C. A. 1995. Impacts of Historic Land Use on Trout Habitat in the Southern Appalachians - historical overview and research response. Pages 121-124 In R. Barnhart, B. Shake, and R. H. Hamre, eds. Proceedings of Wild Trout V - Wild Trout in the 21st Century.
18. Lemly, A. D. 1995. Techniques of fisheries management: Using large woody debris to improve trout habitat in Appalachian Mountain streams. Pages 60-67 in J.E. Johnson, editor. Silviculture in the Appalachian Mountains. Vol. II. College of Forestry and Wildlife Resources, Virginia Tech University, Blacksburg, VA.
19. Flebbe, P. A., and C. A. Dolloff. 1995. Trout use of woody debris and habitat in Appalachian wilderness streams of North Carolina. North American Journal of Fisheries Management. 15: 579-591. (1246k)
20. Dolloff, C. A. 1994. Large woody debris: the common denominator for integrated environmental management of forest streams. Pages 93-108 in J. Cairns, T. V. Crawford, and H. Salwasser, eds. Implementing Integrated Environmental Management. Virginia Tech Press.
21. Flebbe, P. A., and C. A. Dolloff. 1993. Habitat structure and woody debris in Southern Appalachian wilderness streams. Proceedings of the Annual Conference of the Southeastern Association of Fish and Wildlife Agencies 45: 444-450.
22. Dolloff, C. A., D. G. Hankin, and G. H. Reeves. 1993. Basinwide estimation of habitat and fish populations in streams. Gen. Tech. Rep. SE-83. Asheville, NC: U.S. Department of Agriculture, Forest Service, Southeastern Forest Experiment Station. 25 pp. (4184k)
23. Lemly, A. D. 1993. Stream sedimentation in the southern Appalachians: Impacts on aquatic insects. Virginia Cooperative Extension Service Bulletin February-March: 25-29.

1. Welsh, D. J., J. Hornbeck, E. S. Verry, C. A. Dolloff, and J. G. Greis. 2000. Riparian area management: themes and recommendations. Chapter 20 in E. S. Verry, J. Hornbeck, and C. A. Dolloff, eds. Riparian management in the eastern continental United States. CRC-Lewis Publishers, FL.
2. Dolloff, C. A. and J. R. Webster. 2000. "Particulate organic contributions from forests to streams: debris isn't so bad." Chapter 6 in E. S. Verry, J. Hornbeck, and C. A. Dolloff, eds. Riparian management in the eastern continental United States. CRC-Lewis Publishers, FL. (150k)
3. Verry, E. S., and C. A. Dolloff. 2000. The Challenge of managing for healthy riparian areas. Chapter 1 in E. S. Verry, J. Hornbeck, and C. A. Dolloff, eds. Riparian management in the eastern continental United States. CRC-Lewis Publishers, FL.
4. Stuart, G., C. A. Dolloff, and E. S. Corbett. 1996. "Riparian area functions and values" - presented by G. Stuart (WO-S&PF) at the EPA sponsored conference on Riparian Ecosystems held March 15-18, Atlanta, GA.
5. Hornbeck, J. W., E. S. Verry, and C. A. Dolloff. 1995. Managing riparian areas in northeastern forests: a quest for desired future conditions. Proceedings of the 1994 Society of American Foresters/Canadian Institute of Forestry Convention, Anchorage, AK. Pages 299-304.
6. Pert, H. A., S. L. McMullin, and C. A. Dolloff. 1995. Determining desired conditions of riparian areas in the southeastern United States: examination of two decision-making processes.
7. Davis, J. R., J. A. Barnes, G. E. Ward, D. H. Van Lear, D. C. Guynn, Jr., C. A. Dolloff, and M. Hudy. 1995. Beaver impacts on timber on the Chauga River drainage in South Carolina. Eastern Wildlife Damage Control Conference. 18 p.

1. Lemly, A. D., R. T. Kingsford, and J. R. Thompson. 2000. Irrigated agriculture and wildlife conservation: Conflict on a global scale. Environmental Management 25: 485-512. (613k)
2. Lemly, A. D., and R. S. King. 2000. An insect-bacteria bioindicator for assessing detrimental nutrient enrichment in wetlands. Wetlands. 20(1): 91-100. (204k)
3. Lemly, A. D. 1999. Case study: Contaminant impacts on freshwater wetlands at Kesterson National Wildlife Refuge, California. Chapter 6 (pages 191-206) in M.A. Lewis et al., editors. Ecotoxicology and Risk Assessment for Wetlands. SETAC Press, Pensacola, FL.
4. Lemly, A. D. 1998. A Functional Assessment of Wetland Ecosystem Response to Highways: Macroinvertebrate Studies for 1997. Technical Report. U.S. Forest Service, Southern Research Station, Coldwater Fisheries Research Unit, Department of Fisheries and Wildlife Sciences, Virginia Tech University, Blacksburg, VA. 18 pages.
5. Lemly, A. D. 1997. A Functional Assessment of Wetland Ecosystem Response to Highways: Macroinvertebrate Studies for 1996. Technical Report. U.S. Forest Service, Southern Research Station, Coldwater Fisheries Research Unit, Department of Fisheries and Wildlife Sciences, Virginia Tech University, Blacksburg, VA. 23 pages.
6. Lemly, A. D. 1997. Risk assessment as an environmental management tool: Considerations for freshwater wetlands. Environmental Management 21: 343-358. (123k)
7. Lemly, A. D., and C. J. Richardson. 1997. Guidelines for risk assessment in wetlands. Environmental Monitoring and Assessment 47: 117-134. (98k)
8. Lemly, A. D. 1997. A Preliminary Assessment of Bacterial Gill Disease in Freshwater Shrimp from the Northern Everglades. Technical Report. U.S. Forest Service, Southern Research Station, Coldwater Fisheries Research Unit, Department of Fisheries and Wildlife Sciences, Virginia Tech University, Blacksburg, VA. 12 pages.
9. Lemly, A. D. 1996. A Functional Assessment of Wetland Ecosystem Response to Highways: Macroinvertebrate Studies for 1995. Technical Report. U.S. Forest Service, Southern Research Station, Coldwater Fisheries Research Unit, Department of Fisheries and Wildlife Sciences, Virginia Tech University, Blacksburg, VA. 12 pages.
10. Lemly, A. D. 1996. Risk assessment in the regulatory process for wetlands. Ecotoxicology and Environmental Safety 35: 41-56. (122k)

1. Lemly, A. D. 2001. Recommendations for a procedure to set watershed TMDLs for selenium. Technical Assistance Report to the U.S. Environmental Protection Agency, Office of Water, Health and Ecological Criteria Division. 16 pp. (90k)
2. Lemly, A. D. 2001. A technical framework for implementing aquatic ecosystem loading limits (TMDLs) to reduce selenium pollution from phosphate mining wastes on Caribou National Forest, Idaho. Technical Assistance Report to the U.S. Department of Justice Environment and Natural Resources Division, Environmental Enforcement Section. 18 pp. (94k)
3. Lemly, A. D. 2001. A procedure for setting environmentally safe TMDLs for selenium in San Diego Creek and Newport Bay, California. Technical Assistance Report to the California State Water Quality Control Board, Santa Ana Region. 16 pp. (89k)
4. Lemly, A. D. 2001. A procedure for developing ecosystem loading limits (TMDLs) for selenium in watersheds affected by gold mining in northern argentina. Technical Assistance Report to the Argentina Federal Secretary of Natural Resources. 17 pp. (90k)
5. Lemly, A. D. 2000. Guidelines for conducting TMDL consultations on selenium. Technical Assistance Report to the U.S. Fish and Wildlife Service Division of Environmental Contaminants. 12 pp. (36k)
6. Lemly, A. D. 1999. Selenium transport and bioaccumulation in aquatic ecosystems: a proposal for water quality criteria based on hydrological units. Ecotoxicology and Environmental Safety. 42: 150-156. (148k)
7. Hamilton, S. J. and A. D. Lemly. 1999. Water-sediment controversy in setting environmental standards for selenium. Ecotoxicology and Environmental Safety. 44: 227-235. (66k)
8. Lemly, A. D. 1999. Irrigation drainage. Encyclopedia of Deserts. 304-307. (25k)
9. Lemly, A. D. 1999. Selenium impacts on fish: an insidious time bomb. Human and Ecological Risk Assessment. 5(6): 1139-1151. (92k)
10. Lemly, A. D. 1998. Pathology of selenium poisoning in fish. Chapter 16 (Pages 281-296) in W.T. Frankenberger and R.A. Engberg, editors. Environmental Chemistry of Selenium. Marcel-Dekker Press, New York, NY.
11. Lemly, A. D. 1998. A position paper on selenium in ecotoxicology: A procedure for deriving site-specific water quality criteria. Ecotoxicology and Environmental Safety 39: 1-9. (239k)
12. Lemly, A. D. 1998. Aquatic Cycling of Selenium and its Relevance to Water Quality Criteria. Technical Report. U.S. Forest Service, Southern Research Station, Coldwater Fisheries Research Unit, Department of Fisheries and Wildlife Sciences, Virginia Tech University, Blacksburg, VA. 17 pages.
13. Lemly, A. D. 1997. Ecosystem recovery following selenium contamination in a freshwater reservoir. Ecotoxicology and Environmental Safety 36: 275-281. (124k)
14. Lemly, A. D. 1997. Environmental hazard of selenium in the Animas La Plata Water Development Project. Ecotoxicology and Environmental Safety 37: 92-96. (41k)
15. Lemly, A. D. 1997. Role of season in aquatic hazard assessment. Environmental Monitoring and Assessment 45: 89-98. (75k)
16. Lemly, A. D. 1997. A teratogenic deformity index for evaluating impacts of selenium on fish populations. Ecotoxicology and Environmental Safety 37: 259-266. (750k)
17. Lemly, A. D. 1997. Environmental implications of excessive selenium. Biomedical and Environmental Sciences 10: 415-435.
18. Lemly, A. D. 1996. Identifying and reducing environmental risks from agricultural irrigation drainage in developing countries. Proceedings of the World Congress of Toxicology in Developing Countries 3: 177-19.
19. Lemly. A. D. 1996. Winter Stress Syndrome: An important consideration for hazard assessment of aquatic pollutants. Ecotoxicology and Environmental Safety 34: 223-227. (68k)
20. Lemly, A. D. 1996. Assessing the toxic threat of selenium to fish and aquatic birds. Environmental Monitoring and Assessment 43: 19-35.
21. Lemly, A. D. 1996. Selenium in Aquatic Organisms. Chapter 19 (pages 427-445) in W. N. Beyer, G. H. Heinz, and A. W. Redmon-Norwood, editors. Environmental Contaminants in Wildlife: Interpreting Tissue Concentrations. Lewis Publishers, Boca Raton, FL.
22. Lemly, A. D. 1996. Wastewater discharges may be most hazardous to fish during winter. Environmental Pollution 93: 169-174. (642k)
23. Lemly, A. D. 1996. Evaluation of the hazard quotient method for risk assessment of selenium. Ecotoxicology and Environmental Safety 35: 156-162. (51k)
24. Lemly, A. D. 1995. A protocol for aquatic hazard assessment of selenium. Ecotoxicology and Environmental Safety 32: 280-288.
25. Lemly, A. D. 1995. Hazard of Selenium to Fish and Migratory Birds at Ouray National Wildlife Refuge, Utah. Technical Report. U.S. Forest Service, Southern Research Station, Coldwater Fisheries Research Unit, Department of Fisheries and Wildlife Sciences, Virginia Tech University, Blacksburg, VA. 42 pages.
26. Lemly, A. D. 1995. Recommendations for a Selenium Water Quality Criterion. Technical Report. U.S. Forest Service, Southern Research Station, Coldwater Fisheries Research Unit, Department of Fisheries and Wildlife Sciences, Virginia Tech University, Blacksburg, VA. 12 pages.
27. Lemly, A. D. 1994. Agriculture and wildlife: Ecological implications of subsurface irrigation drainage. Journal of Arid Environments 28: 85-94.
28. Lemly, A. D. 1994. Irrigated agriculture and freshwater wetlands: A struggle for coexistence in the western United States. Wetlands Ecology and Management 3: 3-15.
29. Lemly, A. D. 1994. Mining in northern Canada: Expanding the industry while protecting Arctic fishes. Ecotoxicology and Environmental Safety 29: 229-242. (3769k)
30. Lemly, A. D. 1993. Subsurface agricultural irrigation drainage: The need for regulation. Regulatory Toxicology and Pharmacology 17: 157-180.
31. Lemly, A. D., S. E. Finger, and M. K. Nelson. 1993. Sources and impacts of irrigation drainwater contaminants in arid wetlands. Environmental Toxicology and Chemistry 12: 2265-2279
32. Lemly, A. D. 1993. Guidelines for evaluating selenium data from aquatic monitoring and assessment studies. Environmental Monitoring and Assessment 28: 83-100. (1319k)
33. Lemly, A. D. 1993. Teratogenic effects of selenium in natural populations of freshwater fish. Ecotoxicology and Environmental Safety 26: 181-204.
34. Lemly, A. D. 1993. Metabolic stress during winter increases the toxicity of selenium to fish. Aquatic Toxicology 27: 133-158. (1488k)

1. Dolloff, C. A. 2000. Fish and aquatic organisms. Chapter 17 in G. E. Dissmeyer, ed. Drinking water from forests and grasslands - A synthesis of the scientific literature. USDA Forest Service WO-GTR. 248 pages.
2. Fenn, M. E., and nine co-authors. In Press. Nitrogen excess in North American ecosystems : predisposing factors, ecosystem responses, and management strategies.

SRS-4202 Home	Southern Research Station	Forest Service	USDA	Virginia Tech

---

Last Modified: 11/16/06

Send questions or comments regarding this web site to Matt Winn: mattwinn@vt.edu
For further information on the Coldwater Fisheries Research Unit, contact Andy Dolloff: adolloff@fs.fed.us